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Plants

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Pathogens

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Mammals

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Integrated data platform accellerating discovery.

OmicsDB offers an integrated platform for studying biological networks in multiple organisms, as well as accessing gene expression data. By expanding the classic single species databases across species, it is possible to leverage the amount of information to an even higher level.

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Curated data ready to use.

We curate gene expression data from RNA-seq and microarrays in our database, enabling you to perform multiple different forms of analysis within genomics. We offer a wide range of web-tools to assist you in visualization and analysis of plantpathogen transcriptomics data from different conditions, treatments and tissues. Our database is the largest database specialized with plant pathogen gene expression data, and contains data from nimblegen, agilent, affymetrix as well as rna-seq. If you have special needs, we can help you how to perform analysis on gene expression data both from microarrays and rna-seq.

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Analysis and visualization with the click of a button.

To make further analysis easier we also provide interpro domains, Gene ontology annotation, Orthologs, protein interaction data and protein sequences.

We offer the possibility to obtain and plot the expression profiles of your gene(s) of interrest, both as a line plot and as a heatmap.

Gene co-expression

Since similar patterns in gene expression profiles often suggest functional relationships between the genes, gene co-expression networks are a great way of identifying possible related genes to your gene of interrest. We offer the possibility to expore gene co-expression networks, for identifying possible functional related genes.







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OUR FEATURES

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